mirror of
https://github.com/NVIDIA/cuda-samples.git
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522 lines
13 KiB
C
522 lines
13 KiB
C
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/*
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* Matrix Market I/O library for ANSI C
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*
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* See http://math.nist.gov/MatrixMarket for details.
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*
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*
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*/
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/* avoid Windows warnings (for example: strcpy, fscanf, etc.) */
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#if defined(_WIN32)
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#define _CRT_SECURE_NO_WARNINGS
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#endif
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#include <stdio.h>
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#include <string.h>
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#include <stdlib.h>
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#include <ctype.h>
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#include "mmio.h"
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int mm_read_unsymmetric_sparse(const char *fname, int *M_, int *N_, int *nz_,
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double **val_, int **I_, int **J_)
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{
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FILE *f;
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MM_typecode matcode;
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int M, N, nz;
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int i;
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double *val;
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int *I, *J;
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if ((f = fopen(fname, "r")) == NULL)
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return -1;
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if (mm_read_banner(f, &matcode) != 0)
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{
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printf("mm_read_unsymetric: Could not process Matrix Market banner ");
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printf(" in file [%s]\n", fname);
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return -1;
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}
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if ( !(mm_is_real(matcode) && mm_is_matrix(matcode) &&
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mm_is_sparse(matcode)))
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{
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fprintf(stderr, "Sorry, this application does not support ");
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fprintf(stderr, "Market Market type: [%s]\n",
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mm_typecode_to_str(matcode));
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return -1;
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}
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/* find out size of sparse matrix: M, N, nz .... */
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if (mm_read_mtx_crd_size(f, &M, &N, &nz) !=0)
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{
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fprintf(stderr, "read_unsymmetric_sparse(): could not parse matrix size.\n");
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return -1;
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}
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*M_ = M;
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*N_ = N;
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*nz_ = nz;
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/* reseve memory for matrices */
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I = (int *) malloc(nz * sizeof(int));
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J = (int *) malloc(nz * sizeof(int));
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val = (double *) malloc(nz * sizeof(double));
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*val_ = val;
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*I_ = I;
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*J_ = J;
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/* NOTE: when reading in doubles, ANSI C requires the use of the "l" */
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/* specifier as in "%lg", "%lf", "%le", otherwise errors will occur */
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/* (ANSI C X3.159-1989, Sec. 4.9.6.2, p. 136 lines 13-15) */
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for (i=0; i<nz; i++)
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{
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if (fscanf(f, "%d %d %lg\n", &I[i], &J[i], &val[i]) != 3) {
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return -1;
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}
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I[i]--; /* adjust from 1-based to 0-based */
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J[i]--;
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}
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fclose(f);
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return 0;
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}
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int mm_is_valid(MM_typecode matcode)
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{
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if (!mm_is_matrix(matcode)) return 0;
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if (mm_is_dense(matcode) && mm_is_pattern(matcode)) return 0;
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if (mm_is_real(matcode) && mm_is_hermitian(matcode)) return 0;
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if (mm_is_pattern(matcode) && (mm_is_hermitian(matcode) ||
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mm_is_skew(matcode))) return 0;
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return 1;
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}
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int mm_read_banner(FILE *f, MM_typecode *matcode)
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{
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char line[MM_MAX_LINE_LENGTH];
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char banner[MM_MAX_TOKEN_LENGTH];
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char mtx[MM_MAX_TOKEN_LENGTH];
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char crd[MM_MAX_TOKEN_LENGTH];
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char data_type[MM_MAX_TOKEN_LENGTH];
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char storage_scheme[MM_MAX_TOKEN_LENGTH];
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char *p;
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mm_clear_typecode(matcode);
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if (fgets(line, MM_MAX_LINE_LENGTH, f) == NULL)
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return MM_PREMATURE_EOF;
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if (sscanf(line, "%s %s %s %s %s", banner, mtx, crd, data_type,
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storage_scheme) != 5)
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return MM_PREMATURE_EOF;
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for (p=mtx; *p!='\0'; *p=tolower(*p),p++); /* convert to lower case */
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for (p=crd; *p!='\0'; *p=tolower(*p),p++);
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for (p=data_type; *p!='\0'; *p=tolower(*p),p++);
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for (p=storage_scheme; *p!='\0'; *p=tolower(*p),p++);
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/* check for banner */
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if (strncmp(banner, MatrixMarketBanner, strlen(MatrixMarketBanner)) != 0)
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return MM_NO_HEADER;
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/* first field should be "mtx" */
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if (strcmp(mtx, MM_MTX_STR) != 0)
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return MM_UNSUPPORTED_TYPE;
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mm_set_matrix(matcode);
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/* second field describes whether this is a sparse matrix (in coordinate
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storgae) or a dense array */
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if (strcmp(crd, MM_SPARSE_STR) == 0)
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mm_set_sparse(matcode);
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else
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if (strcmp(crd, MM_DENSE_STR) == 0)
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mm_set_dense(matcode);
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else
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return MM_UNSUPPORTED_TYPE;
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/* third field */
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if (strcmp(data_type, MM_REAL_STR) == 0)
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mm_set_real(matcode);
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else
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if (strcmp(data_type, MM_COMPLEX_STR) == 0)
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mm_set_complex(matcode);
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else
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if (strcmp(data_type, MM_PATTERN_STR) == 0)
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mm_set_pattern(matcode);
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else
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if (strcmp(data_type, MM_INT_STR) == 0)
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mm_set_integer(matcode);
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else
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return MM_UNSUPPORTED_TYPE;
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/* fourth field */
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if (strcmp(storage_scheme, MM_GENERAL_STR) == 0)
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mm_set_general(matcode);
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else
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if (strcmp(storage_scheme, MM_SYMM_STR) == 0)
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mm_set_symmetric(matcode);
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else
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if (strcmp(storage_scheme, MM_HERM_STR) == 0)
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mm_set_hermitian(matcode);
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else
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if (strcmp(storage_scheme, MM_SKEW_STR) == 0)
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mm_set_skew(matcode);
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else
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return MM_UNSUPPORTED_TYPE;
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return 0;
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}
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int mm_write_mtx_crd_size(FILE *f, int M, int N, int nz)
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{
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if (fprintf(f, "%d %d %d\n", M, N, nz) != 3)
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return MM_COULD_NOT_WRITE_FILE;
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else
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return 0;
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}
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int mm_read_mtx_crd_size(FILE *f, int *M, int *N, int *nz )
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{
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char line[MM_MAX_LINE_LENGTH];
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int num_items_read;
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/* set return null parameter values, in case we exit with errors */
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*M = *N = *nz = 0;
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/* now continue scanning until you reach the end-of-comments */
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do
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{
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if (fgets(line,MM_MAX_LINE_LENGTH,f) == NULL)
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return MM_PREMATURE_EOF;
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}while (line[0] == '%');
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/* line[] is either blank or has M,N, nz */
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if (sscanf(line, "%d %d %d", M, N, nz) == 3)
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return 0;
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else
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do
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{
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num_items_read = fscanf(f, "%d %d %d", M, N, nz);
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if (num_items_read == EOF) return MM_PREMATURE_EOF;
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}
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while (num_items_read != 3);
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return 0;
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}
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int mm_read_mtx_array_size(FILE *f, int *M, int *N)
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{
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char line[MM_MAX_LINE_LENGTH];
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int num_items_read;
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/* set return null parameter values, in case we exit with errors */
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*M = *N = 0;
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/* now continue scanning until you reach the end-of-comments */
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do
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{
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if (fgets(line,MM_MAX_LINE_LENGTH,f) == NULL)
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return MM_PREMATURE_EOF;
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}while (line[0] == '%');
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/* line[] is either blank or has M,N, nz */
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if (sscanf(line, "%d %d", M, N) == 2)
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return 0;
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else /* we have a blank line */
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do
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{
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num_items_read = fscanf(f, "%d %d", M, N);
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if (num_items_read == EOF) return MM_PREMATURE_EOF;
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}
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while (num_items_read != 2);
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return 0;
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}
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int mm_write_mtx_array_size(FILE *f, int M, int N)
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{
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if (fprintf(f, "%d %d\n", M, N) != 2)
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return MM_COULD_NOT_WRITE_FILE;
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else
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return 0;
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}
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/*-------------------------------------------------------------------------*/
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/******************************************************************/
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/* use when I[], J[], and val[]J, and val[] are already allocated */
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/******************************************************************/
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int mm_read_mtx_crd_data(FILE *f, int M, int N, int nz, int I[], int J[],
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double val[], MM_typecode matcode)
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{
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int i;
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if (mm_is_complex(matcode))
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{
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for (i=0; i<nz; i++)
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if (fscanf(f, "%d %d %lg %lg", &I[i], &J[i], &val[2*i], &val[2*i+1])
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!= 4) return MM_PREMATURE_EOF;
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}
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else if (mm_is_real(matcode) || mm_is_integer(matcode))
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{
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for (i=0; i<nz; i++)
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{
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if (fscanf(f, "%d %d %lg\n", &I[i], &J[i], &val[i])
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!= 3) return MM_PREMATURE_EOF;
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}
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}
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else if (mm_is_pattern(matcode))
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{
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for (i=0; i<nz; i++)
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if (fscanf(f, "%d %d", &I[i], &J[i])
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!= 2) return MM_PREMATURE_EOF;
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}
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else
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return MM_UNSUPPORTED_TYPE;
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return 0;
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}
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int mm_read_mtx_crd_entry(FILE *f, int *I, int *J,
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double *real, double *imag, MM_typecode matcode)
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{
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if (mm_is_complex(matcode))
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{
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if (fscanf(f, "%d %d %lg %lg", I, J, real, imag)
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!= 4) return MM_PREMATURE_EOF;
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}
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else if (mm_is_real(matcode) || mm_is_integer(matcode))
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{
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if (fscanf(f, "%d %d %lg\n", I, J, real)
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!= 3) return MM_PREMATURE_EOF;
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}
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else if (mm_is_pattern(matcode))
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{
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if (fscanf(f, "%d %d", I, J) != 2) return MM_PREMATURE_EOF;
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}
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else
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return MM_UNSUPPORTED_TYPE;
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return 0;
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}
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/************************************************************************
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mm_read_mtx_crd() fills M, N, nz, array of values, and return
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type code, e.g. 'MCRS'
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if matrix is complex, values[] is of size 2*nz,
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(nz pairs of real/imaginary values)
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************************************************************************/
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int mm_read_mtx_crd(char *fname, int *M, int *N, int *nz, int **I, int **J,
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double **val, MM_typecode *matcode)
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{
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int ret_code;
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FILE *f;
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if (strcmp(fname, "stdin") == 0) f=stdin;
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else
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if ((f = fopen(fname, "r")) == NULL)
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return MM_COULD_NOT_READ_FILE;
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if ((ret_code = mm_read_banner(f, matcode)) != 0)
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return ret_code;
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if (!(mm_is_valid(*matcode) && mm_is_sparse(*matcode) &&
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mm_is_matrix(*matcode)))
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return MM_UNSUPPORTED_TYPE;
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if ((ret_code = mm_read_mtx_crd_size(f, M, N, nz)) != 0)
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return ret_code;
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*I = (int *) malloc(*nz * sizeof(int));
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*J = (int *) malloc(*nz * sizeof(int));
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*val = NULL;
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if (mm_is_complex(*matcode))
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{
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*val = (double *) malloc(*nz * 2 * sizeof(double));
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ret_code = mm_read_mtx_crd_data(f, *M, *N, *nz, *I, *J, *val,
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*matcode);
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if (ret_code != 0) return ret_code;
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}
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else if (mm_is_real(*matcode) || mm_is_integer(*matcode))
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{
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*val = (double *) malloc(*nz * sizeof(double));
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ret_code = mm_read_mtx_crd_data(f, *M, *N, *nz, *I, *J, *val,
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*matcode);
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if (ret_code != 0) return ret_code;
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}
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else if (mm_is_pattern(*matcode))
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{
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ret_code = mm_read_mtx_crd_data(f, *M, *N, *nz, *I, *J, *val,
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*matcode);
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if (ret_code != 0) return ret_code;
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}
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if (f != stdin) fclose(f);
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return 0;
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}
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int mm_write_banner(FILE *f, MM_typecode matcode)
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{
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char *str = mm_typecode_to_str(matcode);
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int ret_code;
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ret_code = fprintf(f, "%s %s\n", MatrixMarketBanner, str);
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free(str);
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if (ret_code !=2 )
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return MM_COULD_NOT_WRITE_FILE;
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else
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return 0;
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}
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int mm_write_mtx_crd(char fname[], int M, int N, int nz, int I[], int J[],
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double val[], MM_typecode matcode)
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{
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FILE *f;
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int i;
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if (strcmp(fname, "stdout") == 0)
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f = stdout;
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else
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if ((f = fopen(fname, "w")) == NULL)
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return MM_COULD_NOT_WRITE_FILE;
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/* print banner followed by typecode */
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fprintf(f, "%s ", MatrixMarketBanner);
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fprintf(f, "%s\n", mm_typecode_to_str(matcode));
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/* print matrix sizes and nonzeros */
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fprintf(f, "%d %d %d\n", M, N, nz);
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/* print values */
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if (mm_is_pattern(matcode))
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for (i=0; i<nz; i++)
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fprintf(f, "%d %d\n", I[i], J[i]);
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else
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if (mm_is_integer(matcode))
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for (i=0; i<nz; i++)
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fprintf(f, "%d %d %d\n", I[i], J[i], (int)val[i]);
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else
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|
if (mm_is_real(matcode))
|
||
|
for (i=0; i<nz; i++)
|
||
|
fprintf(f, "%d %d %20.16g\n", I[i], J[i], val[i]);
|
||
|
else
|
||
|
if (mm_is_complex(matcode))
|
||
|
for (i=0; i<nz; i++)
|
||
|
fprintf(f, "%d %d %20.16g %20.16g\n", I[i], J[i], val[2*i],
|
||
|
val[2*i+1]);
|
||
|
else
|
||
|
{
|
||
|
if (f != stdout) fclose(f);
|
||
|
return MM_UNSUPPORTED_TYPE;
|
||
|
}
|
||
|
|
||
|
if (f !=stdout) fclose(f);
|
||
|
|
||
|
return 0;
|
||
|
}
|
||
|
|
||
|
|
||
|
/**
|
||
|
* Create a new copy of a string s. mm_strdup() is a common routine, but
|
||
|
* not part of ANSI C, so it is included here. Used by mm_typecode_to_str().
|
||
|
*
|
||
|
*/
|
||
|
static char *mm_strdup(const char *s)
|
||
|
{
|
||
|
size_t len = strlen(s);
|
||
|
char *s2 = (char *) malloc((len+1)*sizeof(char));
|
||
|
return strcpy(s2, s);
|
||
|
}
|
||
|
|
||
|
char *mm_typecode_to_str(MM_typecode matcode)
|
||
|
{
|
||
|
char buffer[MM_MAX_LINE_LENGTH];
|
||
|
char *types[4];
|
||
|
//char *mm_strdup(const char *);
|
||
|
//int error =0;
|
||
|
|
||
|
/* check for MTX type */
|
||
|
if (mm_is_matrix(matcode))
|
||
|
types[0] = MM_MTX_STR;
|
||
|
else
|
||
|
return NULL; // error=1;
|
||
|
|
||
|
/* check for CRD or ARR matrix */
|
||
|
if (mm_is_sparse(matcode))
|
||
|
types[1] = MM_SPARSE_STR;
|
||
|
else
|
||
|
if (mm_is_dense(matcode))
|
||
|
types[1] = MM_DENSE_STR;
|
||
|
else
|
||
|
return NULL;
|
||
|
|
||
|
/* check for element data type */
|
||
|
if (mm_is_real(matcode))
|
||
|
types[2] = MM_REAL_STR;
|
||
|
else
|
||
|
if (mm_is_complex(matcode))
|
||
|
types[2] = MM_COMPLEX_STR;
|
||
|
else
|
||
|
if (mm_is_pattern(matcode))
|
||
|
types[2] = MM_PATTERN_STR;
|
||
|
else
|
||
|
if (mm_is_integer(matcode))
|
||
|
types[2] = MM_INT_STR;
|
||
|
else
|
||
|
return NULL;
|
||
|
|
||
|
|
||
|
/* check for symmetry type */
|
||
|
if (mm_is_general(matcode))
|
||
|
types[3] = MM_GENERAL_STR;
|
||
|
else
|
||
|
if (mm_is_symmetric(matcode))
|
||
|
types[3] = MM_SYMM_STR;
|
||
|
else
|
||
|
if (mm_is_hermitian(matcode))
|
||
|
types[3] = MM_HERM_STR;
|
||
|
else
|
||
|
if (mm_is_skew(matcode))
|
||
|
types[3] = MM_SKEW_STR;
|
||
|
else
|
||
|
return NULL;
|
||
|
|
||
|
sprintf(buffer,"%s %s %s %s", types[0], types[1], types[2], types[3]);
|
||
|
return mm_strdup(buffer);
|
||
|
|
||
|
}
|